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Advances and Applications in Bioinformatics and Chemistry
ISSN: 1178-6949
- View all (98)
- Volume 17, 2024 (5)
- Volume 16, 2023 (6)
- Volume 15, 2022 (7)
- Volume 14, 2021 (9)
- Volume 13, 2020 (3)
- Volume 12, 2019 (3)
- Volume 11, 2018 (1)
- Volume 10, 2017 (7)
- Volume 9, 2016 (1)
- Volume 8, 2015 (5)
- Volume 7, 2014 (5)
- Volume 6, 2013 (6)
- Volume 5, 2012 (4)
- Volume 4, 2011 (5)
- Volume 3, 2010 (12)
- Volume 2, 2009 (10)
- Volume 1, 2008 (9)
Journal Articles:
- 98 records -
Bioinformatics Study of Flavonoids From Genus Erythrina As Ace2 inhibitor Candidates For Covid-19 Treatment
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Herlina T, Akili AWR, Nishinarizki V, Hardianto A, Latip J
Advances and Applications in Bioinformatics and Chemistry 2024, 17:61-70
Published Date: 14 May 2024
In silico Molecular Docking Approach to Identify Potential Antihypertensive Compounds from Ajuga integrifolia Buch.-Ham. Ex D. Don (Armagusa)
Tessema FB, Gonfa YH, Asfaw TB, Tadesse MG, Bachheti RK
Advances and Applications in Bioinformatics and Chemistry 2024, 17:47-59
Published Date: 11 March 2024
Pyrazoline B-Paclitaxel or Doxorubicin Combination Drugs Show Synergistic Activity Against Cancer Cells: In silico Study
Wiraswati HL, Bashari MH, Alfarafisa NM, Ma'ruf IF, Sholikhah EN, Wahyuningsih TD, Satriyo PB, Mustofa M, Satria D, Damayanti E
Advances and Applications in Bioinformatics and Chemistry 2024, 17:33-46
Published Date: 27 February 2024
Unraveling Potential Glyoxalase-I Inhibitors Utilizing Structure-Based Drug Design Techniques
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Fetian MH, Al-Balas QA
Advances and Applications in Bioinformatics and Chemistry 2024, 17:21-32
Published Date: 5 February 2024
Elucidation of Molecular Interactions Between Drug–Polymer in Amorphous Solid Dispersion by a Computational Approach Using Molecular Dynamics Simulations
Aulifa DL, Al Shofwan AA, Megantara S, Fakih TM, Budiman A
Advances and Applications in Bioinformatics and Chemistry 2024, 17:1-19
Published Date: 23 January 2024
Synthesis, Biological Evaluation and Molecular Docking Studies of Novel Series of Bis-1,2,4-Triazoles as Thymidine Phosphorylase Inhibitor
Korol N, Holovko-Kamoshenkova OM, Slivka M, Pallah O, Onysko MY, Kryvovyaz A, Boyko NV, Yaremko OV, Mariychuk R
Advances and Applications in Bioinformatics and Chemistry 2023, 16:93-102
Published Date: 4 August 2023
Ultrasonic-Assisted Synthesis of Heterocyclic Curcumin Analogs as Antidiabetic, Antibacterial, and Antioxidant Agents Combined with in vitro and in silico Studies
Zelelew D, Endale M, Melaku Y, Geremew T, Eswaramoorthy R, Tufa LT, Choi Y, Lee J
Advances and Applications in Bioinformatics and Chemistry 2023, 16:61-91
Published Date: 28 July 2023
Facing Antitubercular Resistance: Identification of Potential Direct Inhibitors Targeting InhA Enzyme and Generation of 3D-pharmacophore Model by in silico Approach
EL Haddoumi G, Mansouri M, Bendani H, Bouricha EM, Kandoussi I, Belyamani L, Ibrahimi A
Advances and Applications in Bioinformatics and Chemistry 2023, 16:49-59
Published Date: 28 April 2023
In silico Study of Antiviral Activity of Polyphenol Compounds from Ocimum basilicum by Molecular Docking, ADMET, and Drug-Likeness Analysis
Kurnia D, Putri SA, Tumilaar SG, Zainuddin A, Dharsono HDA, Amin MF
Advances and Applications in Bioinformatics and Chemistry 2023, 16:37-47
Published Date: 26 April 2023
Computational Study of Bis-(1-(Benzoyl)-3-Methyl Thiourea) Platinum (II) Complex Derivatives as Anticancer Candidates
Ruswanto R, Mardianingrum R, Nofianti T, Fizriani R, Siswandono S
Advances and Applications in Bioinformatics and Chemistry 2023, 16:15-36
Published Date: 10 February 2023
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In silico Screening of Potential SARS-CoV-2 Main Protease Inhibitors from Thymus schimperi
Mengist HM, Khalid Z, Adane F
Advances and Applications in Bioinformatics and Chemistry 2023, 16:1-13
Published Date: 18 January 2023
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The Potential of 24-Propylcholestrol as Antibacterial Oral Bacteria of Enterococcus faecalis ATCC 29212 and Inhibitor Biofilms Formation: in vitro and in silico Study
Windaryanti D, Gabriel CS, Hidayat IW, Zainuddin A, Dharsono HDA, Satari MH, Kurnia D
Advances and Applications in Bioinformatics and Chemistry 2022, 15:99-111
Published Date: 22 December 2022
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Antibacterial and Antioxidant Activities, in silico Molecular Docking, ADMET and DFT Analysis of Compounds from Roots of Cyphostemma cyphopetalum
Degfie T, Ombito JO, Demissie TB, Eswaramoorthy R, Dekebo A, Endale M
Advances and Applications in Bioinformatics and Chemistry 2022, 15:79-97
Published Date: 26 October 2022
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In silico Drug Repurposing of Anticancer Drug 5-FU and Analogues Against SARS-CoV-2 Main Protease: Molecular Docking, Molecular Dynamics Simulation, Pharmacokinetics and Chemical Reactivity Studies
Matondo A, Dendera W, Isamura BK, Ngbolua KTN, Mambo HVS, Muzomwe M, Mudogo V
Advances and Applications in Bioinformatics and Chemistry 2022, 15:59-77
Published Date: 15 August 2022
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Multi Epitope-Based Vaccine Design for Protection Against Mycobacterium tuberculosis and SARS-CoV-2 Coinfection
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Pitaloka DAE, Izzati A, Amirah SR, Syakuran LA
Advances and Applications in Bioinformatics and Chemistry 2022, 15:43-57
Published Date: 2 August 2022
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De Novo Design of Cathepsin B1 Inhibitors as Potential Anti-Schistosomal Agents Using Computational Studies
Alzain AA, Elbadwi FA
Advances and Applications in Bioinformatics and Chemistry 2022, 15:29-41
Published Date: 1 August 2022
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Comparative Structural Analysis of Human ACE2 Receptor with Spike Protein of SARS-CoV-2 Variants: Implications to Understand Infectivity of the Virus
Koley T, Goswami A, Kumar M, Upadhyay N, Hariprasad G
Advances and Applications in Bioinformatics and Chemistry 2022, 15:21-27
Published Date: 16 June 2022
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Binding Analysis Using Accelerated Molecular Dynamics Simulations and Future Perspectives
Pawnikar S, Bhattarai A, Wang J, Miao Y
Advances and Applications in Bioinformatics and Chemistry 2022, 15:1-19
Published Date: 6 January 2022
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Antibacterial, Docking, DFT and ADMET Properties Evaluation of Chalcone-Sulfonamide Derivatives Prepared Using ZnO Nanoparticle Catalysis
Weyesa A, Eswaramoorthy R, Melaku Y, Mulugeta E
Advances and Applications in Bioinformatics and Chemistry 2021, 14:133-144
Published Date: 11 December 2021
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Antimicrobial Activity, in silico Molecular Docking, ADMET and DFT Analysis of Secondary Metabolites from Roots of Three Ethiopian Medicinal Plants
Anza M, Endale M, Cardona L, Cortes D, Eswaramoorthy R, Zueco J, Rico H, Trelis M, Abarca B
Advances and Applications in Bioinformatics and Chemistry 2021, 14:117-132
Published Date: 20 August 2021
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Bio-Mechanism Inhibitory Prediction of β-Sitosterol from Kemangi (Ocimum basilicum L.) as an Inhibitor of MurA Enzyme of Oral Bacteria: In vitro and in silico Study
Evangelina IA, Herdiyati Y, Laviana A, Rikmasari R, Zubaedah C, Anisah, Kurnia D
Advances and Applications in Bioinformatics and Chemistry 2021, 14:103-115
Published Date: 23 June 2021
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O-GlcNAcylation Prediction: An Unattained Objective
Mauri T, Menu-Bouaouiche L, Bardor M, Lefebvre T, Lensink MF, Brysbaert G
Advances and Applications in Bioinformatics and Chemistry 2021, 14:87-102
Published Date: 8 June 2021
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Chemoinformatic Analysis of Psychotropic and Antihistaminic Drugs in the Light of Experimental Anti-SARS-CoV-2 Activities
Villoutreix BO, Krishnamoorthy R, Tamouza R, Leboyer M, Beaune P
Advances and Applications in Bioinformatics and Chemistry 2021, 14:71-85
Published Date: 12 April 2021
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Enhanced Understanding of Molecular Interactions and Function Underlying Pain Processes Through Networks of Transcript Isoforms, Genes, and Gene Families
Zhang P, Southey BR, Sweedler JV, Pradhan A, Rodriguez-Zas SL
Advances and Applications in Bioinformatics and Chemistry 2021, 14:49-69
Published Date: 18 February 2021
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An Overview of Current Uses and Future Opportunities for Computer-Assisted Design of Vaccines for Neglected Tropical Diseases
Robleda-Castillo R, Ros-Lucas A, Martinez-Peinado N, Alonso-Padilla J
Advances and Applications in Bioinformatics and Chemistry 2021, 14:25-47
Published Date: 15 February 2021
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In silico Molecular Docking, DFT Analysis and ADMET Studies of Carbazole Alkaloid and Coumarins from Roots of Clausena anisata: A Potent Inhibitor for Quorum Sensing
Eswaramoorthy R, Hailekiros H, Kedir F, Endale M
Advances and Applications in Bioinformatics and Chemistry 2021, 14:13-24
Published Date: 5 February 2021
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Transcriptome Analysis of Pseudomonas aeruginosa Biofilm Following the Exposure to Malaysian Stingless Bee Honey
Seder N, Abu Bakar MH, Abu Rayyan WS
Advances and Applications in Bioinformatics and Chemistry 2021, 14:1-11
Published Date: 14 January 2021
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Developing a Kinase-Specific Target Selection Method Using a Structure-Based Machine Learning Approach
Afanasyeva A, Nagao C, Mizuguchi K
Advances and Applications in Bioinformatics and Chemistry 2020, 13:27-40
Published Date: 2 December 2020
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Current Challenges and Opportunities in Designing Protein–Protein Interaction Targeted Drugs
Shin WH, Kumazawa K, Imai K, Hirokawa T, Kihara D
Advances and Applications in Bioinformatics and Chemistry 2020, 13:11-25
Published Date: 12 November 2020
Structural and Molecular Docking Analytical Studies of the Predicted Ligand Binding Sites of Cadherin-1 in Cancer Prognostics
Bakare OO, Fadaka AO, Keyster M, Pretorius A
Advances and Applications in Bioinformatics and Chemistry 2020, 13:1-9
Published Date: 28 July 2020
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Cytotoxicity Of Chalcone Of Eugenia aquea Burm F. Leaves Against T47D Breast Cancer Cell Lines And Its Prediction As An Estrogen Receptor Antagonist Based On Pharmacophore-Molecular Dynamics Simulation
Muchtaridi M, Yusuf M, Syahidah HN, Subarnas A, Zamri A, Bryant SD, Langer T
Advances and Applications in Bioinformatics and Chemistry 2019, 12:33-43
Published Date: 6 November 2019
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Computational evaluation of natural compounds as potential inhibitors of human PEPCK-M: an alternative for lung cancer therapy
Baptista LPR, Sinatti VVC, Da Silva JHM, Dardenne LE, Guimarães AC
Advances and Applications in Bioinformatics and Chemistry 2019, 12:15-32
Published Date: 7 August 2019
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Molecular dynamics study to improve the substrate adsorption of Saccharomycopsis fibuligera R64 alpha-amylase by designing a new surface binding site
Baroroh U, Yusuf M, Rachman SD, Ishmayana S, Hasan K, Subroto T
Advances and Applications in Bioinformatics and Chemistry 2019, 12:1-13
Published Date: 7 June 2019
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![Plain language summary](assets/img/article_icons/plain-language.png)
Computational analysis of ligand-receptor interactions in wild-type and mutant erythropoietin complexes
Pekas NJ, Newton SS
Advances and Applications in Bioinformatics and Chemistry 2018, 11:1-8
Published Date: 15 October 2018
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Structural and functional characterization of the Helicobacter pylori cytidine 5'-monophosphate-pseudaminic acid synthase PseF: molecular insight into substrate recognition and catalysis mechanism
Wahid SUH
Advances and Applications in Bioinformatics and Chemistry 2017, 10:79-88
Published Date: 6 October 2017
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Computational tool for optimizing the essential oils utilization in inhibiting the bacterial growth
El-Attar NE, Awad WA
Advances and Applications in Bioinformatics and Chemistry 2017, 10:65-78
Published Date: 5 September 2017
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Prioritizing single-nucleotide polymorphisms and variants associated with clinical mastitis
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Suravajhala P, Benso A
Advances and Applications in Bioinformatics and Chemistry 2017, 10:57-64
Published Date: 12 June 2017
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The identification of protein domains that mediate functional interactions between Rab-GTPases and RabGAPs using 3D protein modeling
![](cr_data/cache/submission_images/s121000/121245/revised figure 2_200_200_90.jpg)
Davie JJ, Faitar SL
Advances and Applications in Bioinformatics and Chemistry 2017, 10:47-56
Published Date: 10 April 2017
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Genetic interrelations in the actinomycin biosynthetic gene clusters of Streptomyces antibioticus IMRU 3720 and Streptomyces chrysomallus ATCC11523, producers of actinomycin X and actinomycin C
Crnovčić I, Rückert C, Semsary S, Lang M, Kalinowski J, Keller U
Advances and Applications in Bioinformatics and Chemistry 2017, 10:29-46
Published Date: 7 April 2017
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In silico-based vaccine design against Ebola virus glycoprotein
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Dash R, Das R, Junaid M, Akash MFC, Islam A, Hosen SMZ
Advances and Applications in Bioinformatics and Chemistry 2017, 10:11-28
Published Date: 21 March 2017
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Mapping circulating serum miRNAs to their immune-related target mRNAs
Nosirov B, Billaud J, Vandenbon A, Diez D, Wijaya E, Ishii KJ, Teraguchi S, Standley DM
Advances and Applications in Bioinformatics and Chemistry 2017, 10:1-9
Published Date: 2 February 2017
![Noteworthy comment: This is a nice review on available protein-ligand docking methods, focused on drug design, which can be of interest for the biomedical community in general. Well written, comprehensive coverage of field, and inspiring examples. I believe this review will be very popular and highly cited.](assets/img/article_icons/noteworthy.png)
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Molecular docking as a popular tool in drug design, an in silico travel
de Ruyck J, Brysbaert G, Blossey R, Lensink MF
Advances and Applications in Bioinformatics and Chemistry 2016, 9:1-11
Published Date: 24 June 2016
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Identification of potential drug targets by subtractive genome analysis of Escherichia coli O157:H7: an in silico approach
Mondal SI, Ferdous S, Jewel NA, Akter A, Mahmud Z, Islam MM, Afrin T, Karim N
Advances and Applications in Bioinformatics and Chemistry 2015, 8:49-63
Published Date: 8 December 2015
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Molecular dynamics simulations: advances and applications
Hospital A, Goñi JR, Orozco M, Gelpí JL
Advances and Applications in Bioinformatics and Chemistry 2015, 8:37-47
Published Date: 19 November 2015
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Parallel computing in genomic research: advances and applications
Ocaña K, de Oliveira D
Advances and Applications in Bioinformatics and Chemistry 2015, 8:23-35
Published Date: 13 November 2015
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Tools for visualization and analysis of molecular networks, pathways, and -omics data
Villaveces JM, Koti P, Habermann BH
Advances and Applications in Bioinformatics and Chemistry 2015, 8:11-22
Published Date: 4 June 2015
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Identification of highly conserved regions in L-segment of Crimean–Congo hemorrhagic fever virus and immunoinformatic prediction about potential novel vaccine
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Oany AR, Ahmad SAI, Hossain MU, Jyoti TP
Advances and Applications in Bioinformatics and Chemistry 2015, 8:1-10
Published Date: 8 January 2015
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Identification and analysis of potential targets in Streptococcus sanguinis using computer aided protein data analysis
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Chowdhury MRH, Bhuiyan MIK, Saha A, Mosleh IM, Mondol S, Ahmed CMS
Advances and Applications in Bioinformatics and Chemistry 2014, 7:45-54
Published Date: 25 November 2014
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The hemagglutinin of the influenza A(H1N1)pdm09 is mutating towards stability
Castelán-Vega JA, Magaña-Hernández A, Jiménez-Alberto A, Ribas-Aparicio RM
Advances and Applications in Bioinformatics and Chemistry 2014, 7:37-44
Published Date: 3 October 2014
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In silico predictive model to determine vector-mediated transport properties for the blood–brain barrier choline transporter
Shityakov S, Förster C
Advances and Applications in Bioinformatics and Chemistry 2014, 7:23-36
Published Date: 2 September 2014